The 4 algorithms which predict the PCTFP (Yap5-Rgm1)
Balaji S, Babu MM, Iyer LM, Luscombe NM, Aravind L
Comprehensive analysis of combinatorial regulation using the transcriptional regulatory network of yeast. J Mol Biol. 2006, 360(1):213-227.
Chang YH, Wang YC, Chen BS
Identification of transcription factor cooperativity via stochastic system model. Bioinformatics 2006, 22:2276-2282.
Chen MJ, Chou LC, Hsieh TT, Lee DD, Liu KW, Yu CY, Oyang YJ, Tsai HK, Chen CY
De novo motif discovery facilitates identification of interactions between transcription factors in Saccharomyces cerevisiae. Bioinformatics 2012, 28:701-708.
Yu X, Lin J, Masuda T, Esumi N, Zack DJ, Qian J
Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae. Nucleic Acids Res 2006, 34:917-927.